miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|64696299|gb|BJ836695.1|BJ836695 AACATGGTACAGTATTATATTTGCAAAAGAATTAATAACATATAATAACATATCTTAACTATTAAATAGTATAATAACCA
TCACATTTTTCTGAATGATGAGCAAAAACCTTTAAAAGAATAAGACATTTTTTTCTTAATCAAAATAATTTATCAACAAA
AATATGTCCGAATAAAGATTAAGCAGTTTTGCATGTTGTATTCAAAGTCAAGCTTTGATAAATGTCTTCAATTTGGGGAA
GAGACGCAGGGCATTTTGTGTGGTGACCTCTATGACCTTCTCCAGAGGTATACCCTTGATTTTGGCGATATATTCTGCAC
TAATACTGATATTCCGTGGTACATTCCTCACCTGCTTTTCCGGTCCCAGTGCAGGAGCATCTGTTTCTAAACACATGCTC
TCCAGAGGAATCTGCTTCACAAGTTTCTGCTGATCGCTTCTTATGATGGATGGAGGTATAGAGAAGTAATATCCAGCTTT
CACACCCTCCATTGCGACTGAAGGTTTGCCATCAAATGCATGTAACAGAGCATTCTCTATACCTAATTCCTTCAGAAGAT
GGACGGTTGGTCTCCCCGCAGATCTCGAGTGCACATTCAATGGGAGGTTTAACTGTTTAGCGATGTTCGCCTGTTGAATG
AGCACTTGTCTCTGACTGTCTTTACCAGCATCACTGTTGACCACACGTGGTGTAAAGTCCAGGCCGACCTCACCAATAGC
CACAATGTGTTCCTTGTATTTGTCAATCAGGGGTAAAGCGGCATCTAAATCCTGAACTACAG




Most similar to sp|A1A4M4|TATD3_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|A1A4M4|TATD3_BOVIN Putative deoxyribonuclease TATDN3 OS=Bos
           taurus GN=TATDN3 PE=2 SV=1
          Length = 273

 Score =  281 bits (720), Expect = 3e-75
 Identities = 136/187 (72%), Positives = 164/187 (87%)
 Frame = -3

Query: 777 VQDLDAALPLIDKYKEHIVAIGEVGLDFTPRVVNSDAGKDSQRQVLIQQANIAKQLNLPL 598
           ++DLD ALP+I+ YK+ ++AIGEVGLDF+PR   +D  K+ QRQVLI+Q  +AK+LNLPL
Sbjct: 85  LKDLDVALPIIENYKDQLLAIGEVGLDFSPRFAGTDEQKEEQRQVLIRQVQLAKRLNLPL 144

Query: 597 NVHSRSAGRPTVHLLKELGIENALLHAFDGKPSVAMEGVKAGYYFSIPPSIIRSDQQKLV 418
           NVHSRSAGRPT+ LL E G +  LLHAFDG+PSVAMEGVKAGY+FSIPPSIIRS QQKLV
Sbjct: 145 NVHSRSAGRPTISLLNEQGADKVLLHAFDGRPSVAMEGVKAGYFFSIPPSIIRSGQQKLV 204

Query: 417 KQIPLESMCLETDAPALGPEKQVRNVPRNISISAEYIAKIKGIPLEKVIEVTTQNALRLF 238
           KQ+PL S+CLETD+PALGPEKQVRN PRNISISAEYIA++KG+ +E+VIEVTTQNAL+LF
Sbjct: 205 KQLPLTSICLETDSPALGPEKQVRNEPRNISISAEYIAQVKGVSVEEVIEVTTQNALKLF 264

Query: 237 PKLKTFI 217
           PKL+  +
Sbjct: 265 PKLQRLL 271